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Visit our Middle East Homepage Remember me. Go to Global Home. Deeper Diversification Touchdown Aberdeen Listen to Aberdeen portfolio managers and investment experts as they discuss thoughts on markets, on-the-ground research findings and investment processes. Podcasts Thinking aloud Our latest insight, opinion and thoughts on global macro events and investment strategies Learn more about Thinking Aloud Resume slider Pause slider.

Literature Insight News, views and information from leading industry experts including interviews with funds managers. Or, for a database to be regenerated without re-executing the pipeline. Mailing List Subscribe to the stacks-user mailing list for technical help, and to discuss the use and development of Stacks. Publications Here are a few publications that have used the Stacks pipeline for data analysis. Deriving genotypes from RAD-seq short-read data using Stacks. Nature Protocols. Paris, J. Lost in parameter space: Methods in Ecology and Evolution Catchen, P.

Hohenlohe, S. Bassham, A.


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Amores, and W. Molecular Ecology. Catchen, S. Bassham, T. Wilson, M. Currey, C.

Yeates, and W. The population structure and recent colonization history of Oregon threespine stickleback determined using restriction-site associated DNA-sequencing. Catchen, A. Amores, P. Hohenlohe, W. Cresko, and J. Genes, Genomes, Genetics , 1: Amores, J. Ferrara, Q. Fontenot and J. Genome evolution and meiotic maps by massively parallel DNA sequencing: Spotted gar, an outgroup for the teleost genome duplication.

Genetics , Amish, J. Catchen, F. Allendorf, G. RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow trout and westslope cutthroat trout. Molecular Ecology Resources , 11 s1: Emerson, C. Merz, J. Cresko, W.

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Bradshaw, C. Resolving postglacial phylogeography using high-throughput sequencing. Proceedings of the National Academy of Science , What are the requirements to run Stacks?